Unique Name | Clone Name | Alias | Accession Number | Length (bp) | Predicted Gene Count | Current Gene count | Curated Gene Count | Obsolete Gene Count | Current Gene Density (bp/gene) | %Current Gene (scaffold length) | %Curated Gene (scaffold length) | %Curated Gene (overall genes) | Predicted TE Count | Current TE Count | Curated TE Count | Obsolete TE Count | Current TE Density (bp/TE) | %Current TE (scaffold length) | %Curated TE (scaffold length) | %Curated TE (overall TE) | Current TE Gene count | Curated TE Gene count |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|

scaffold_0133 | scaffold02452 | 87107 | 14 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0135 | scaffold02493 | 41329 | 6 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 1 | 0 | 0 | 0 | n/a | n/a | n/a | 0% | 0 | 0 | ||

scaffold_0136 | scaffold02586 | 291744 | 43 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0138 | scaffold02606 | 83710 | 15 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0139 | scaffold02635 | 27561 | 3 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0142 | scaffold02702 | 116706 | 21 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 1 | 0 | 0 | 0 | n/a | n/a | n/a | 0% | 0 | 0 | ||

scaffold_0143 | scaffold02716 | 116041 | 21 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0144 | scaffold02874 | 21926 | 4 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0145 | scaffold02928 | 15158 | 1 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0146 | scaffold03008 | 20839 | 3 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 1 | 0 | 0 | 0 | n/a | n/a | n/a | 0% | 0 | 0 | ||

scaffold_0147 | scaffold03068 | 23432 | 3 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0148 | scaffold03152 | 20475 | 9 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0150 | scaffold03225 | 3414 | 1 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0151 | scaffold03287 | 22240 | 5 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

scaffold_0154 | scaffold03363 | 19299 | 3 | 0 | 0 | 0 | n/a | 0% | 0% | 0% | 0 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 | ||

Overall: 15 scaffolds | 910981 | 152 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 3 | 0 | 0 | 0 | n/a | n/a | n/a | n/a | 0 | 0 |

__Calculation details:__

- genes count excludes transposable element genes (TE gene);
- genes length excludes transposable element genes (TE gene) and transposable elements (TE) inside introns;
- predicted genes are genes found by Eugene;
- current gene count includes non-obsolete predicted or curated genes;
- curated genes include obsolete genes;
- genes density is given by the formula: scaffold length / current gene count
- percent of genes is given by the formula: overall current gene length / scaffold length;
- percent of curated genes over scaffold length is given by the formula: overall curated gene length / scaffold length
- percent of curated genes over all genes is given by the formula: curated gene count / predicted gene count
- predicted transposable elements (TE) are TE found by Repet;
- current TE count includes non-obsolete predicted or curated TE with a /mobile_element qualifier;
- curated TE include obsolete TE;
- TE density is given by the formula: scaffold length / current TE count
- curated TE density is given by the formula: scaffold length / curated TE count
- percent of TE is given by the formula: overall current TE length / scaffold length
- percent of curated TE over all scaffold length is given by the formula: overall curated TE length / scaffold length
- percent of curated TE over all transposable elements is given by the formula: curated TE count / predicted TE count

__Note:__ these statistics __ are restricted to public data only__.