1 | man_ms345_Ma4012B06_Musa_Grouper_239_Malign_3:LARD | Ma4012B06_te010 | 16 | 151 | 136 | reverse | automatic | Ma4012B06_te010 | |
2 | man_ms296_Ma4012B06_Musa_Recon_113_Malign_4:LARD | Ma4012B06_te020 | 152 | 1506 | 1355 | forward | automatic | Ma4012B06_te020 | |
3 | Ma4012B06_te030 | Ma4012B06_te030 | 2430 | 2613 | 184 | reverse | curated | retrotransposon: LTR: Thalie: Copia: Ma4012B06_te030: Solo LTR (fragment) | cpoiron |
4 | man_ms327_Ma4012B06_Musa_Recon_13_Malign_4:LTRuncomp | Ma4012B06_te040 | 2624 | 2658 | 35 | forward | automatic | Ma4012B06_te040 | |
5 | man_ms308_Ma4012B06_Musa_Recon_348_Malign_3:LTRuncomp | Ma4012B06_te050 | 9022 | 9170 | 149 | forward | automatic | Ma4012B06_te050 | |
6 | man_ms312_Ma4012B06_Musa_Recon_39_Malign_7:TIRuncomp | Ma4012B06_te060 | 9543 | 9713 | 171 | reverse | automatic | Ma4012B06_te060 | |
7 | man_ms348_Ma4012B06_Musa_Recon_99_Malign_20:LTRcomp | Ma4012B06_te070 | 9714 | 9821 | 108 | forward | automatic | Ma4012B06_te070 | |
8 | man_ms355_Ma4012B06_Musa_Recon_78_Malign_11:NoCat | Ma4012B06_te080 | 12270 | 12294 | 25 | forward | automatic | Ma4012B06_te080 | |
9 | man_ms349_Ma4012B06_Musa_Recon_40_Malign_3:LTRuncomp | Ma4012B06_te090 | 12295 | 12454 | 160 | reverse | automatic | Ma4012B06_te090 | |
10 | man_ms356_Ma4012B06_Musa_Recon_78_Malign_11:NoCat | Ma4012B06_te100 | 12455 | 12522 | 68 | forward | automatic | Ma4012B06_te100 | |
11 | man_ms309_Ma4012B06_Musa_Recon_348_Malign_3:LTRuncomp | Ma4012B06_te110 | 26902 | 27103 | 202 | reverse | automatic | Ma4012B06_te110 | |
12 | man_ms310_Ma4012B06_Musa_Recon_348_Malign_3:LTRuncomp | Ma4012B06_te120 | 27767 | 28565 | 799 | forward | automatic | Ma4012B06_te120 | |
13 | man_ms313_Ma4012B06_Musa_Recon_346_Malign_5:confused | Ma4012B06_te130 | 28240 | 28448 | 209 | reverse | automatic | Ma4012B06_te130 | |
14 | man_ms357_Ma4012B06_Musa_Recon_78_Malign_11:NoCat | Ma4012B06_te140 | 33287 | 33311 | 25 | reverse | automatic | Ma4012B06_te140 | |
15 | man_ms314_Ma4012B06_Musa_Recon_346_Malign_5:confused | Ma4012B06_te150 | 33312 | 33420 | 109 | forward | automatic | Ma4012B06_te150 | |
16 | man_ms315_Ma4012B06_Musa_Recon_346_Malign_5:confused | Ma4012B06_te160 | 33421 | 33661 | 241 | reverse | automatic | Ma4012B06_te160 | |
17 | man_ms350_Ma4012B06_Musa_Recon_80_Malign_4:LTRuncomp | Ma4012B06_te170 | 33662 | 33752 | 91 | forward | automatic | Ma4012B06_te170 | |
18 | man_ms358_Ma4012B06_Musa_Recon_78_Malign_11:NoCat | Ma4012B06_te180 | 39183 | 39203 | 21 | reverse | automatic | Ma4012B06_te180 | |
19 | man_ms359_Ma4012B06_Musa_Recon_78_Malign_11:NoCat | Ma4012B06_te190 | 39204 | 39787 | 584 | forward | automatic | Ma4012B06_te190 | |
20 | man_ms341_Ma4012B06_Musa_Recon_352_Malign_9:confused | Ma4012B06_te200 | 44797 | 45043 | 247 | reverse | automatic | Ma4012B06_te200 | |
21 | man_ms360_Ma4012B06_Musa_Recon_78_Malign_11:NoCat | Ma4012B06_te210 | 45044 | 45176 | 133 | forward | automatic | Ma4012B06_te210 | |
22 | man_ms316_Ma4012B06_Musa_Recon_146_Malign_5:LTRcomp | Ma4012B06_te220 | 45560 | 46026 | 467 | reverse | automatic | Ma4012B06_te220 | |
23 | man_ms319_Ma4012B06_Musa_Recon_141_Malign_11:LTRuncomp | Ma4012B06_te230 | 46186 | 46236 | 51 | forward | automatic | Ma4012B06_te230 | |
24 | man_ms321_Ma4012B06_Musa_Grouper_110_Malign_5:LARD | Ma4012B06_te240 | 46239 | 46718 | 480 | reverse | automatic | Ma4012B06_te240 | |
25 | man_ms320_Ma4012B06_Musa_Recon_141_Malign_11:LTRuncomp | Ma4012B06_te250 | 46719 | 47819 | 1101 | forward | automatic | Ma4012B06_te250 | |
26 | man_ms323_Ma4012B06_Musa_Recon_9_Malign_13:LTRuncomp | Ma4012B06_te260 | 48054 | 56361 | 8308 | forward | curated | retrotransposon: LTR: Thalie: Copia: Ma4012B06_te260 | cpoiron |
27 | man_ms332_Ma4012B06_Musa_Recon_354_Malign_5:LTRuncomp | Ma4012B06_te320 | 56629 | 56680 | 52 | reverse | automatic | Ma4012B06_te320 obsolete | cpoiron |
28 | man_ms324_Ma4012B06_Musa_Recon_9_Malign_13:LTRuncomp | Ma4012B06_te330 | 56681 | 56856 | 176 | forward | automatic | Ma4012B06_te330 obsolete | cpoiron |
29 | man_ms325_Ma4012B06_Musa_Recon_9_Malign_13:LTRuncomp | Ma4012B06_te340 | 56857 | 58260 | 1404 | reverse | automatic | Ma4012B06_te340 | |
30 | man_ms322_Ma4012B06_Musa_Grouper_110_Malign_5:LARD | Ma4012B06_te350 | 56911 | 57341 | 431 | reverse | automatic | Ma4012B06_te350 | |
31 | man_ms297_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te360 | 58263 | 59563 | 1301 | reverse | automatic | Ma4012B06_te360 | |
32 | man_ms354_Ma4012B06_Musa_Grouper_30_Malign_8:LARD | Ma4012B06_te370 | 59564 | 59594 | 31 | reverse | automatic | Ma4012B06_te370 | |
33 | man_ms335_Ma4012B06_Musa_Recon_147_Malign_8:LTRuncomp | Ma4012B06_te380 | 59960 | 60051 | 92 | forward | automatic | Ma4012B06_te380 | |
34 | man_ms317_Ma4012B06_Musa_Recon_146_Malign_5:LTRcomp | Ma4012B06_te390 | 60052 | 60204 | 153 | forward | automatic | Ma4012B06_te390 | |
35 | man_ms338_Ma4012B06_Musa_Grouper_121_Malign_3:LARD | Ma4012B06_te400 | 62149 | 62337 | 189 | forward | automatic | Ma4012B06_te400 obsolete | cpoiron |
36 | man_ms353_Ma4012B06_Musa_Grouper_56_Malign_11:LARD | Ma4012B06_te410 | 62411 | 62781 | 371 | forward | curated | retrotransposon: LTR: Thalie: Copia: Ma4012B06_te410: Solo LTR (fragment) | cpoiron |
37 | man_ms333_Ma4012B06_Musa_Recon_354_Malign_5:LTRuncomp | Ma4012B06_te420 | 62411 | 63723 | 1313 | reverse | automatic | Ma4012B06_te420 obsolete | cpoiron |
38 | man_ms339_Ma4012B06_Musa_Grouper_244_Malign_3:LTRuncomp | Ma4012B06_te430 | 64794 | 65458 | 665 | forward | automatic | Ma4012B06_te430 | |
39 | man_ms3283_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te440 | 65460 | 65807 | 348 | reverse | automatic | Ma4012B06_te440 obsolete | cpoiron |
40 | man_ms344_Ma4012B06_Musa_Recon_169_Malign_4:confused | Ma4012B06_te470 | 65772 | 70753 | 4982 | forward | curated | Ma4012B06_te470 retrotransposon LTR Gypsy Muku | cpoiron |
41 | man_ms3284_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te490 | 70751 | 70812 | 62 | reverse | automatic | Ma4012B06_te490 obsolete | cpoiron |
42 | man_ms299_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te500 | 70813 | 71040 | 228 | reverse | automatic | Ma4012B06_te500 obsolete | cpoiron |
43 | man_ms300_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te510 | 71041 | 72353 | 1313 | forward | automatic | Ma4012B06_te510 | |
44 | man_ms3285_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te520 | 71086 | 71346 | 261 | reverse | curated | retrotransposon: LTR: Circe: Ma4012B06_te520: Solo LTR (fragment) | cpoiron |
45 | man_ms302_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te530 | 72854 | 75542 | 2689 | forward | automatic | Ma4012B06_te530 | |
46 | man_ms3286_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te540 | 75543 | 76188 | 646 | reverse | automatic | Ma4012B06_te540 | |
47 | man_ms303_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te550 | 75761 | 75943 | 183 | forward | automatic | Ma4012B06_te550 | |
48 | man_ms304_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te560 | 75944 | 75968 | 25 | reverse | automatic | Ma4012B06_te560 | |
49 | man_ms342_Ma4012B06_Musa_Recon_352_Malign_9:confused | Ma4012B06_te570 | 76189 | 76274 | 86 | reverse | automatic | Ma4012B06_te570 | |
50 | man_ms340_Ma4012B06_Musa_Grouper_244_Malign_3:LTRuncomp | Ma4012B06_te580 | 76398 | 76533 | 136 | forward | automatic | Ma4012B06_te580 | |
51 | man_ms343_Ma4012B06_Musa_Recon_352_Malign_9:confused | Ma4012B06_te590 | 77242 | 77262 | 21 | forward | automatic | Ma4012B06_te590 | |
52 | man_ms334_Ma4012B06_Musa_Recon_354_Malign_5:LTRuncomp | Ma4012B06_te600 | 77270 | 77784 | 515 | reverse | automatic | Ma4012B06_te600 | |
53 | man_ms329_Ma4012B06_Musa_Recon_13_Malign_4:LTRuncomp | Ma4012B06_te610 | 77785 | 79798 | 2014 | forward | automatic | Ma4012B06_te610 | |
54 | man_ms305_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te630 | 80316 | 82648 | 2333 | reverse | automatic | Ma4012B06_te630 | |
55 | man_ms330_Ma4012B06_Musa_Recon_13_Malign_4:LTRuncomp | Ma4012B06_te620 | 80441 | 82073 | 1633 | forward | automatic | Ma4012B06_te620 obsolete | cpoiron |
56 | man_ms306_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te640 | 81934 | 81976 | 43 | reverse | automatic | Ma4012B06_te640 | |
57 | man_ms307_Ma4012B06_Musa_Grouper_277_Malign_3:confused | Ma4012B06_te650 | 82649 | 82849 | 201 | reverse | automatic | Ma4012B06_te650 | |
58 | man_ms347_Ma4012B06_Musa_Grouper_212_Malign_18:LTRcomp | Ma4012B06_te660 | 88485 | 88773 | 289 | forward | automatic | Ma4012B06_te660 | |
59 | man_ms311_Ma4012B06_Musa_Recon_348_Malign_3:LTRuncomp | Ma4012B06_te670 | 88952 | 89254 | 303 | forward | automatic | Ma4012B06_te670 | |