1 | man_ms1184_Ma4072F16_Musa_Recon_348_Malign_3:LTRuncomp | Ma4072F16_te010 | 5175 | 5742 | 568 | reverse | automatic | Ma4072F16_te010 | |
2 | man_ms1189_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te020 | 5268 | 5320 | 53 | forward | automatic | Ma4072F16_te020 | |
3 | man_ms1239_Ma4072F16_Musa_Recon_80_Malign_4:LTRuncomp | Ma4072F16_te030 | 5321 | 5381 | 61 | forward | automatic | Ma4072F16_te030 | |
4 | man_ms1282_Ma4072F16_Musa_Recon_346_Malign_5:confused | Ma4072F16_te040 | 5382 | 5515 | 134 | forward | automatic | Ma4072F16_te040 | |
5 | man_ms1240_Ma4072F16_Musa_Recon_80_Malign_4:LTRuncomp | Ma4072F16_te050 | 5516 | 5567 | 52 | reverse | automatic | Ma4072F16_te050 | |
6 | man_ms1190_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te060 | 5568 | 5646 | 79 | reverse | automatic | Ma4072F16_te060 | |
7 | man_ms1191_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te070 | 7433 | 7488 | 56 | reverse | automatic | Ma4072F16_te070 | |
8 | man_ms1187_Ma4072F16_Musa_Recon_9_Malign_13:LTRuncomp | Ma4072F16_te080 | 24117 | 24222 | 106 | reverse | automatic | Ma4072F16_te080 | |
9 | man_ms1193_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te090 | 41582 | 41720 | 139 | reverse | automatic | Ma4072F16_te090 | |
10 | man_ms1283_Ma4072F16_Musa_Recon_346_Malign_5:confused | Ma4072F16_te100 | 42082 | 42113 | 32 | reverse | automatic | Ma4072F16_te100 | |
11 | man_ms1284_Ma4072F16_Musa_Recon_346_Malign_5:confused | Ma4072F16_te110 | 42114 | 42240 | 127 | forward | automatic | Ma4072F16_te110 | |
12 | man_ms1204_Ma4072F16_Musa_Recon_287_Malign_3:LTRuncomp | Ma4072F16_te120 | 45891 | 47886 | 1996 | forward | automatic | Ma4072F16_te120 | |
13 | man_ms1253_Ma4072F16_Musa_Recon_164_Malign_11:LTRuncomp | Ma4072F16_te130 | 47887 | 48122 | 236 | reverse | automatic | Ma4072F16_te130 | |
14 | man_ms1194_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te140 | 48746 | 48841 | 96 | forward | automatic | Ma4072F16_te140 | |
15 | man_ms1241_Ma4072F16_Musa_Recon_80_Malign_4:LTRuncomp | Ma4072F16_te150 | 53861 | 53906 | 46 | forward | automatic | Ma4072F16_te150 | |
16 | man_ms1285_Ma4072F16_Musa_Recon_346_Malign_5:confused | Ma4072F16_te160 | 53910 | 54020 | 111 | forward | automatic | Ma4072F16_te160 | |
17 | man_ms1243_Ma4072F16_Musa_Recon_80_Malign_4:LTRuncomp | Ma4072F16_te180 | 54021 | 54050 | 30 | reverse | automatic | Ma4072F16_te180 | |
18 | man_ms1242_Ma4072F16_Musa_Recon_80_Malign_4:LTRuncomp | Ma4072F16_te170 | 54021 | 54050 | 30 | reverse | automatic | Ma4072F16_te170 | |
19 | man_ms1205_Ma4072F16_Musa_Recon_141_Malign_11:LTRuncomp | Ma4072F16_te190 | 54057 | 55409 | 1353 | reverse | automatic | Ma4072F16_te190 | |
20 | man_ms1221_Ma4072F16_Musa_Grouper_110_Malign_5:LARD | Ma4072F16_te200 | 54876 | 55337 | 462 | forward | automatic | Ma4072F16_te200 | |
21 | man_ms1222_Ma4072F16_Musa_Grouper_110_Malign_5:LARD | Ma4072F16_te210 | 54876 | 55337 | 462 | forward | automatic | Ma4072F16_te210 | |
22 | man_ms1254_Ma4072F16_Musa_Recon_164_Malign_11:LTRuncomp | Ma4072F16_te220 | 55561 | 55655 | 95 | forward | automatic | Ma4072F16_te220 | |
23 | man_ms1275_Ma4072F16_Musa_Grouper_237_Malign_3:LTRuncomp | Ma4072F16_te230 | 55656 | 56489 | 834 | forward | automatic | Ma4072F16_te230 | |
24 | man_ms1227_Ma4072F16_Musa_Grouper_63_Malign_3:LARD | Ma4072F16_te240 | 62576 | 63132 | 557 | reverse | automatic | Ma4072F16_te240 | |
25 | man_ms1228_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te250 | 64426 | 64557 | 132 | forward | automatic | Ma4072F16_te250 | |
26 | man_ms1195_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te260 | 64558 | 64601 | 44 | forward | automatic | Ma4072F16_te260 | |
27 | man_ms1206_Ma4072F16_Musa_Recon_141_Malign_11:LTRuncomp | Ma4072F16_te270 | 64602 | 66001 | 1400 | reverse | automatic | Ma4072F16_te270 | |
28 | man_ms1223_Ma4072F16_Musa_Grouper_110_Malign_5:LARD | Ma4072F16_te280 | 65458 | 65929 | 472 | forward | automatic | Ma4072F16_te280 | |
29 | man_ms1224_Ma4072F16_Musa_Grouper_110_Malign_5:LARD | Ma4072F16_te290 | 65458 | 65929 | 472 | forward | automatic | Ma4072F16_te290 | |
30 | man_ms1276_Ma4072F16_Musa_Grouper_253_Malign_3:LTRuncomp | Ma4072F16_te300 | 66154 | 67133 | 980 | reverse | automatic | Ma4072F16_te300 | |
31 | man_ms1244_Ma4072F16_Musa_Recon_80_Malign_4:LTRuncomp | Ma4072F16_te310 | 69380 | 69780 | 401 | reverse | automatic | Ma4072F16_te310 | |
32 | man_ms1245_Ma4072F16_Musa_Recon_80_Malign_4:LTRuncomp | Ma4072F16_te320 | 69781 | 69835 | 55 | reverse | automatic | Ma4072F16_te320 | |
33 | man_ms1278_Ma4072F16_Musa_Recon_148_Malign_8:LTRuncomp | Ma4072F16_te330 | 69836 | 70247 | 412 | reverse | automatic | Ma4072F16_te330 | |
34 | man_ms1226_Ma4072F16_Musa_Grouper_165_Malign_3:confused | Ma4072F16_te340 | 70248 | 70467 | 220 | forward | automatic | Ma4072F16_te340 | |
35 | man_ms1246_Ma4072F16_Musa_Recon_80_Malign_4:LTRuncomp | Ma4072F16_te350 | 71635 | 71966 | 332 | reverse | automatic | Ma4072F16_te350 | |
36 | man_ms1286_Ma4072F16_Musa_Recon_346_Malign_5:confused | Ma4072F16_te360 | 74906 | 75137 | 232 | reverse | automatic | Ma4072F16_te360 | |
37 | man_ms1185_Ma4072F16_Musa_Recon_348_Malign_3:LTRuncomp | Ma4072F16_te370 | 86309 | 86530 | 222 | forward | automatic | Ma4072F16_te370 | |
38 | man_ms1186_Ma4072F16_Musa_Recon_348_Malign_3:LTRuncomp | Ma4072F16_te380 | 90550 | 90598 | 49 | reverse | automatic | Ma4072F16_te380 | |
39 | man_ms1188_Ma4072F16_Musa_Recon_9_Malign_13:LTRuncomp | Ma4072F16_te390 | 94170 | 95754 | 1585 | reverse | automatic | Ma4072F16_te390 | |
40 | man_ms1281_Ma4072F16_Musa_Grouper_88_Malign_10:LARD | Ma4072F16_te400 | 95758 | 96098 | 341 | forward | automatic | Ma4072F16_te400 | |
41 | man_ms1207_Ma4072F16_Musa_Recon_141_Malign_11:LTRuncomp | Ma4072F16_te410 | 95758 | 96098 | 341 | reverse | automatic | Ma4072F16_te410 | |
42 | man_ms1229_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te420 | 96099 | 96230 | 132 | forward | automatic | Ma4072F16_te420 | |
43 | man_ms1230_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te430 | 96231 | 97503 | 1273 | forward | automatic | Ma4072F16_te430 | |
44 | man_ms1231_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te440 | 97504 | 97660 | 157 | forward | automatic | Ma4072F16_te440 | |
45 | man_ms1225_Ma4072F16_Musa_Grouper_110_Malign_5:LARD | Ma4072F16_te450 | 97661 | 98281 | 621 | forward | automatic | Ma4072F16_te450 | |
46 | man_ms1208_Ma4072F16_Musa_Recon_141_Malign_11:LTRuncomp | Ma4072F16_te460 | 98386 | 98667 | 282 | reverse | automatic | Ma4072F16_te460 | |
47 | man_ms1256_Ma4072F16_Musa_Grouper_243_Malign_4:LTRuncomp | Ma4072F16_te470 | 98679 | 98710 | 32 | forward | automatic | Ma4072F16_te470 | |
48 | man_ms1209_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te480 | 98711 | 98779 | 69 | forward | automatic | Ma4072F16_te480 | |
49 | man_ms1210_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te490 | 98780 | 102623 | 3844 | forward | automatic | Ma4072F16_te490 | |
50 | man_ms1211_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te500 | 99777 | 99838 | 62 | forward | automatic | Ma4072F16_te500 | |
51 | man_ms1265_Ma4072F16_Musa_Recon_99_Malign_20:LTRcomp | Ma4072F16_te520 | 99901 | 100520 | 620 | reverse | automatic | Ma4072F16_te520 | |
52 | man_ms1268_Ma4072F16_Musa_Grouper_241_Malign_3:LTRcomp | Ma4072F16_te510 | 99901 | 100520 | 620 | forward | automatic | Ma4072F16_te510 | |
53 | man_ms1232_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te530 | 100521 | 101423 | 903 | forward | automatic | Ma4072F16_te530 | |
54 | man_ms1233_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te540 | 101424 | 101491 | 68 | forward | automatic | Ma4072F16_te540 | |
55 | man_ms1257_Ma4072F16_Musa_Grouper_243_Malign_4:LTRuncomp | Ma4072F16_te550 | 101714 | 101790 | 77 | forward | automatic | Ma4072F16_te550 | |
56 | man_ms1252_Ma4072F16_Musa_Grouper_255_Malign_3:LTRuncomp | Ma4072F16_te560 | 101793 | 102582 | 790 | reverse | automatic | Ma4072F16_te560 | |
57 | man_ms1212_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te570 | 103399 | 108926 | 5528 | reverse | curated | retrotransposon : LTR: Circe: Ma4072F16_te570 (fragment) | cpoiron |
58 | man_ms1213_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te580 | 106106 | 107348 | 1243 | forward | automatic | Ma4072F16_te580 | |
59 | man_ms1259_Ma4072F16_Musa_Recon_162_Malign_4:LTRuncomp | Ma4072F16_te600 | 109077 | 109565 | 489 | forward | automatic | Ma4072F16_te600 | |
60 | man_ms1255_Ma4072F16_Musa_Recon_164_Malign_11:LTRuncomp | Ma4072F16_te610 | 109566 | 113938 | 4373 | reverse | curated | retrotransposon : LTR: Thalie : Copia : Ma4072F16_te610 (fragment) | cpoiron |
61 | man_ms1279_Ma4072F16_Musa_Recon_148_Malign_8:LTRuncomp | Ma4072F16_te630 | 114409 | 114440 | 32 | forward | automatic | Ma4072F16_te630 | |
62 | man_ms1280_Ma4072F16_Musa_Recon_148_Malign_8:LTRuncomp | Ma4072F16_te640 | 114441 | 116301 | 1861 | forward | automatic | Ma4072F16_te640 | |
63 | man_ms1262_Ma4072F16_Musa_Recon_147_Malign_8:LTRuncomp | Ma4072F16_te660 | 116297 | 121622 | 5326 | reverse | curated | Ma4072F16_te660 retrotransposon LTR Gypsy Muku | |
64 | man_ms1264_Ma4072F16_Musa_Grouper_251_Malign_4:confused | Ma4072F16_te680 | 121626 | 124755 | 3130 | forward | automatic | Ma4072F16_te680 | |
65 | man_ms1247_Ma4072F16_Musa_Recon_13_Malign_4:LTRuncomp | Ma4072F16_te690 | 124756 | 126199 | 1444 | reverse | curated | retrotransposon : LTR: Thalie : Copia : Ma4072F16_te690 (fragment) | cpoiron |
66 | man_ms1196_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te710 | 127001 | 134435 | 7435 | forward | curated | retrotransposon : LTR: Circe: Ma4072F16_te710 | cpoiron |
67 | man_ms3292_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te760 | 134584 | 135052 | 469 | reverse | curated | retrotransposon : LTR: Thalie : Copia : Ma4072F16_te760: Solo_LTR (5' fragment) | cpoiron |
68 | man_ms1248_Ma4072F16_Musa_Recon_13_Malign_4:LTRuncomp | Ma4072F16_te770 | 135903 | 136172 | 270 | reverse | automatic | Ma4072F16_te770 | |
69 | man_ms1260_Ma4072F16_Musa_Recon_162_Malign_4:LTRuncomp | Ma4072F16_te780 | 136173 | 136362 | 190 | forward | automatic | Ma4072F16_te780 | |
70 | man_ms1277_Ma4072F16_Musa_Grouper_225_Malign_4:LTRuncomp | Ma4072F16_te790 | 136363 | 137271 | 909 | forward | automatic | Ma4072F16_te790 | |
71 | man_ms1249_Ma4072F16_Musa_Recon_13_Malign_4:LTRuncomp | Ma4072F16_te800 | 137272 | 142688 | 5417 | reverse | automatic | Ma4072F16_te800 | |
72 | man_ms1266_Ma4072F16_Musa_Recon_99_Malign_20:LTRcomp | Ma4072F16_te840 | 142890 | 151649 | 8760 | reverse | curated | retrotransposon : LTR: Circe: Ma4072F16_te840 | cpoiron, fcbaurens |
73 | man_ms1237_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te860 | 151662 | 151779 | 118 | forward | automatic | Ma4072F16_te860 | |
74 | man_ms1215_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te870 | 151781 | 153385 | 1605 | forward | automatic | Ma4072F16_te870 | |
75 | man_ms1251_Ma4072F16_Musa_Recon_13_Malign_4:LTRuncomp | Ma4072F16_te880 | 153386 | 154192 | 807 | reverse | automatic | Ma4072F16_te880 | |
76 | man_ms1216_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te890 | 154462 | 155140 | 679 | reverse | curated | retrotransposon : LTR: Circe: Ma4072F16_te890: Solo LTR (3'fragment) | cpoiron |
77 | man_ms1271_Ma4072F16_Musa_Grouper_241_Malign_3:LTRcomp | Ma4072F16_te900 | 155043 | 155235 | 193 | forward | automatic | Ma4072F16_te900 | |
78 | man_ms1272_Ma4072F16_Musa_Recon_349_Malign_4:LTRuncomp | Ma4072F16_te910 | 161155 | 163448 | 2294 | forward | automatic | Ma4072F16_te910 | |
79 | man_ms1199_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te920 | 164490 | 166192 | 1703 | reverse | automatic | Ma4072F16_te920 | |
80 | man_ms1200_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te930 | 167072 | 167120 | 49 | forward | automatic | Ma4072F16_te930 | |
81 | man_ms1273_Ma4072F16_Musa_Recon_349_Malign_4:LTRuncomp | Ma4072F16_te940 | 168358 | 170629 | 2272 | forward | automatic | Ma4072F16_te940 | |
82 | man_ms1217_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te950 | 171041 | 171097 | 57 | forward | automatic | Ma4072F16_te950 | |
83 | man_ms1238_Ma4072F16_Musa_Recon_354_Malign_5:LTRuncomp | Ma4072F16_te960 | 171780 | 172143 | 364 | reverse | curated | retrotransposon : LTR: Circe: Ma4072F16_te960: Solo LTR (3'fragment) | cpoiron |
84 | man_ms1218_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te970 | 174088 | 174449 | 362 | reverse | curated | retrotransposon : LTR: Circe: Ma4072F16_te970: Solo LTR (3'fragment) | cpoiron |
85 | man_ms3293_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te980 | 174578 | 174971 | 394 | forward | curated | retrotransposon : LTR: Circe: Ma4072F16_te980: Solo LTR (3'fragment) | cpoiron |
86 | man_ms1274_Ma4072F16_Musa_Grouper_96_Malign_3:LARD | Ma4072F16_te1010 | 177429 | 178140 | 712 | reverse | automatic | Ma4072F16_te1010 | |
87 | man_ms1287_Ma4072F16_Musa_Recon_98_Malign_12:NoCat | Ma4072F16_te1020 | 178144 | 178186 | 43 | forward | automatic | Ma4072F16_te1020 | |
88 | man_ms1203_Ma4072F16_Musa_Recon_352_Malign_9:confused | Ma4072F16_te1030 | 178187 | 178208 | 22 | reverse | automatic | Ma4072F16_te1030 | |
89 | man_ms1220_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te1040 | 178900 | 179978 | 1079 | forward | automatic | Ma4072F16_te1040 | |
90 | man_ms3294_Ma4072F16_Musa_Grouper_277_Malign_3:confused | Ma4072F16_te1050 | 179979 | 180124 | 146 | forward | automatic | Ma4072F16_te1050 | |